PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02051.1.g00090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 243aa    MW: 26278.7 Da    PI: 5.6417
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02051.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.6e-1176123454
                                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                     ++  rE+ RRdr+N++f eL +++ +    +  Kl+Ka iL  A + + +L
  Zmw_sc02051.1.g00090.1.sm.mkhc  76 SKACREKMRRDRLNDRFLELCSVINPG---KEAKLDKANILSDAARMLAHL 123
                                     6789**********************9...9****************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.1E-1465139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.83972123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.40E-875128No hitNo description
PfamPF000101.6E-876123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-1277145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-778129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MMHDGGGAGD PVEDLLIIGD GDGDDGDLAI FCHGVPALAG DAGLGIEDDS GDAYGLEQTN  60
LGKRGRDEPS SSGPKSKACR EKMRRDRLND RFLELCSVIN PGKEAKLDKA NILSDAARML  120
AHLRGEAQKL KESNEKLRET IKDLKAEKNE LRDEKVSLKA EKERLEQQVK GMSAAPTGFV  180
PHLPHPTAFH PATFAPFATQ HQAPANKSAS IPTAAFPGIA MWQWLPPTVM DTTQDPKLWP  240
PNA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004952164.11e-126PREDICTED: transcription factor ILR3-like
SwissprotQ9FH372e-62ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A0A9LI901e-126A0A0A9LI90_ARUDO; Uncharacterized protein
STRINGSb04g001200.11e-126(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP81733646